Index

A

annotate() (Annotator method) (GildaGrounder method) (GLiNERGrounder method) (SpacyGrounder method)

Annotation (class in ssslm.ner) Annotator (class in ssslm.ner) append_literal_mapping() (in module ssslm.model)

C

comment (LiteralMappingTuple attribute) contributor (LiteralMappingTuple attribute) curie (Annotation attribute) (LiteralMapping attribute) (LiteralMappingTuple attribute) (Match attribute) (PandasTargetType attribute)

D

date (LiteralMappingTuple attribute) date_str (LiteralMapping attribute) default() (GildaMatcher class method)

DEFAULT_PREDICATE (in module ssslm.model) DEFAULT_PREFIXES (in module ssslm.ontology) df_to_literal_mappings() (in module ssslm.model)

F

from_gilda() (LiteralMapping class method)

from_literal_mappings() (GildaMatcher class method) from_row() (LiteralMapping class method)

G

get_all_references() (LiteralMapping method) get_best_match() (Matcher method) get_matches() (GildaMatcher method) (Matcher method) (WrappedMatcher method) get_prefixes() (in module ssslm.model) GildaErrorPolicy (in module ssslm.model)

GildaGrounder (class in ssslm.ner) GildaMatcher (class in ssslm.ner) GLINER_DEFAULT (in module ssslm.ner) GLiNERGrounder (class in ssslm.ner) ground_df() (Matcher method) Grounder (class in ssslm.ner) GrounderHint (in module ssslm.ner) group_literal_mappings() (in module ssslm.model)

I

identifier (Annotation attribute) (Match attribute)

L

language (LiteralMappingTuple attribute) lint_literal_mappings() (in module ssslm.model) literal_mappings_to_df() (in module ssslm.model)

literal_mappings_to_gilda() (in module ssslm.model) LiteralMapping (class in ssslm.model) LiteralMappingIndex (in module ssslm.model) LiteralMappingTuple (class in ssslm.model)

M

make_grounder() (in module ssslm.ner) Match (class in ssslm.ner) match (PandasTargetType attribute) Matcher (class in ssslm.ner) metadata_to_rdf() (in module ssslm.ontology) model_config (Annotation attribute) (LiteralMapping attribute) (Match attribute)

module ssslm.io ssslm.model ssslm.ner ssslm.ontology

N

name (Annotation attribute) (LiteralMapping attribute) (LiteralMappingTuple attribute) (Match attribute)

not_empty() (GildaMatcher method) (Matcher method) (WrappedMatcher method)

P

PandasTargetType (class in ssslm.ner) PATH ssslm-web command line option predicate (LiteralMappingTuple attribute)

PREDICATES (in module ssslm.model) prefix (Annotation attribute) (Match attribute) provenance (LiteralMappingTuple attribute)

R

R (in module ssslm.model) read_annotations() (in module ssslm.ner) read_gilda_terms() (in module ssslm.model) read_literal_mappings() (in module ssslm.model)

read_skos() (in module ssslm.io) reference (Annotation attribute) (PandasTargetType attribute) remap_literal_mappings() (in module ssslm.model)

S

score (Annotation attribute) source (LiteralMappingTuple attribute) SpacyGrounder (class in ssslm.ner) ssslm-web command line option PATH ssslm.io module

ssslm.model module ssslm.ner module ssslm.ontology module substr (Annotation attribute)

T

taxon (LiteralMappingTuple attribute) text (LiteralMappingTuple attribute)

to_gilda() (LiteralMapping method) type (LiteralMappingTuple attribute)

W

WrappedMatcher (class in ssslm.ner) write_annotations() (in module ssslm.ner) write_gilda_terms() (in module ssslm.model)

write_literal_mappings() (in module ssslm.model) write_owl_ttl() (in module ssslm.ontology) Writer (in module ssslm.model)